Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC011495.1-201ENST00000498085 584 ntBASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 LINC00638-201ENST00000555578 2518 ntBASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RCL1Q9Y2P8 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 UPF3AP3-201ENST00000420996 769 ntBASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 BX324167.2-201ENST00000623717 3316 ntBASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 DNM1P41-201ENST00000623634 3350 ntBASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms