Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 AC072061.1-201ENST00000569710 2234 ntBASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 MANEA-AS1-201ENST00000564541 2268 ntBASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
FYCO1Q9BQS8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 NCLP1-201ENST00000445357 1963 ntBASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 AP001120.3-201ENST00000585729 489 ntBASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 AP001527.2-201ENST00000614441 631 ntBASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 AC138932.1-201ENST00000534164 6830 ntBASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FYCO1Q9BQS8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FYCO1Q9BQS8 KRT8P30-201ENST00000432100 650 ntBASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 AC027612.2-202ENST00000445955 1199 ntBASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 MME-218ENST00000625667 363 ntTSL 5 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 CA6-205ENST00000480186 1493 ntTSL 2 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 GRAMD4P6-201ENST00000556999 244 ntBASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 AC007336.3-201ENST00000623886 2160 ntBASIC21.13■□□□□ 0.97
FYCO1Q9BQS8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 FDPSP7-201ENST00000429043 1054 ntBASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 EEF1DP5-201ENST00000431410 772 ntBASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 HLA-W-207ENST00000439514 771 ntBASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 AC233724.9-201ENST00000511694 407 ntBASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 FBXO36P1-201ENST00000579006 471 ntBASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms