Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 AL354877.1-201ENST00000424412 413 ntBASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC003686.1-201ENST00000550956 1034 ntBASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC100827.2-201ENST00000563214 1194 ntBASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC022748.3-201ENST00000621828 275 ntBASIC13.31□□□□□ -0.28
TREX2Q9BQ50 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC135782.3-201ENST00000562782 2105 ntBASIC13.31□□□□□ -0.28
TREX2Q9BQ50 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.31□□□□□ -0.28
TREX2Q9BQ50 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC007952.5-201ENST00000572818 1486 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 MIR3907-201ENST00000579424 151 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 RN7SL574P-201ENST00000581512 297 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC005962.1-201ENST00000584100 773 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AL591471.1-201ENST00000621855 229 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC068760.1-201ENST00000493579 1953 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC092978.1-202ENST00000637590 1327 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 MEX3B-202ENST00000558133 4333 ntBASIC13.3□□□□□ -0.28
TREX2Q9BQ50 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREX2Q9BQ50 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TREX2Q9BQ50 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
TREX2Q9BQ50 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TREX2Q9BQ50 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.29□□□□□ -0.28
TREX2Q9BQ50 CYP4F23P-201ENST00000593402 1579 ntBASIC13.29□□□□□ -0.28
TREX2Q9BQ50 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TREX2Q9BQ50 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms