Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.76□□□□□ -0.69
VGLL1Q99990 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC10.76□□□□□ -0.69
VGLL1Q99990 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AC078819.1-201ENST00000547454 765 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 AC012085.1-201ENST00000548270 765 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AC021016.3-201ENST00000608367 477 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 AC138951.2-201ENST00000623455 1161 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AC006453.4-201ENST00000636949 1252 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC10.76□□□□□ -0.69
VGLL1Q99990 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AL008718.2-201ENST00000609206 1313 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 LAP3P2-201ENST00000454686 1454 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 REXO1L6P-201ENST00000603433 1515 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 MIR326-201ENST00000362220 95 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 EDF1-203ENST00000371649 790 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.75□□□□□ -0.69
VGLL1Q99990 CRB3P1-201ENST00000449338 276 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.75□□□□□ -0.69
VGLL1Q99990 RN7SL837P-201ENST00000463010 287 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 FTH1P14-201ENST00000482930 551 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.75□□□□□ -0.69
VGLL1Q99990 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 AC027307.3-201ENST00000594262 1100 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 AC244669.2-201ENST00000612320 853 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL359845.1-201ENST00000458202 1648 ntBASIC10.75□□□□□ -0.69
VGLL1Q99990 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VGLL1Q99990 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.75□□□□□ -0.69
VGLL1Q99990 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.75□□□□□ -0.69
VGLL1Q99990 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms