Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PTP4A1P2-201ENST00000546033 454 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HPS1Q92902 AC009486.1-201ENST00000569860 813 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
HPS1Q92902 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.11□□□□□ -0.31
HPS1Q92902 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC13.11□□□□□ -0.31
HPS1Q92902 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.11□□□□□ -0.31
HPS1Q92902 AL049840.4-201ENST00000602422 811 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 AC024933.1-201ENST00000608472 348 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HPS1Q92902 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 AC004777.1-201ENST00000624317 287 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 AP000720.1-201ENST00000625091 483 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HPS1Q92902 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
HPS1Q92902 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.11□□□□□ -0.31
HPS1Q92902 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
HPS1Q92902 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HPS1Q92902 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HPS1Q92902 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HPS1Q92902 LINC00567-201ENST00000569854 3409 ntBASIC13.11□□□□□ -0.31
HPS1Q92902 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
HPS1Q92902 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HPS1Q92902 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 AC010536.1-201ENST00000538868 2611 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC13.1□□□□□ -0.31
HPS1Q92902 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC13.1□□□□□ -0.31
HPS1Q92902 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
HPS1Q92902 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.1□□□□□ -0.31
HPS1Q92902 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 MIR5189-201ENST00000577370 114 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
HPS1Q92902 AC097478.2-201ENST00000610572 514 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 AL645728.2-202ENST00000641679 227 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.1□□□□□ -0.31
HPS1Q92902 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 PCDHA6-201ENST00000378126 3267 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HPS1Q92902 INTS4P2-202ENST00000614726 2019 ntBASIC13.1□□□□□ -0.31
HPS1Q92902 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.1□□□□□ -0.31
HPS1Q92902 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms