Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AL161932.2-201ENST00000435436 679 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AC245100.3-201ENST00000441281 285 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 GNAQP1-201ENST00000444815 1067 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AC093004.1-201ENST00000508850 424 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AC133539.2-201ENST00000604757 467 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AC093726.1-201ENST00000608064 963 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AC022364.1-202ENST00000617468 2409 ntBASIC12.23□□□□□ -0.45
BEST4Q8NFU0 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ABCD1P2-201ENST00000429313 1601 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 FKBP4P6-201ENST00000457486 1332 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 AC011700.1-201ENST00000610409 2627 ntBASIC12.22□□□□□ -0.45
BEST4Q8NFU0 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.22□□□□□ -0.45
BEST4Q8NFU0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms