Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC020910.5-201ENST00000623668 1865 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 INE2-201ENST00000630399 1874 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SHC1P1-201ENST00000425230 1745 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AP001267.2-201ENST00000532619 2086 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AL008707.1-201ENST00000422498 534 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AL133466.1-201ENST00000447582 150 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 TUBB8P8-201ENST00000458717 1058 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AC022217.1-201ENST00000521069 738 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 MIR3619-201ENST00000579667 83 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AC022748.3-201ENST00000621828 275 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 C2-206ENST00000442278 2434 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AC130686.1-201ENST00000622936 2466 ntBASIC9.45□□□□□ -0.9
SCXQ7RTU7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SCXQ7RTU7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SCXQ7RTU7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms