Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 FTH1P18-201ENST00000412071 549 ntBASIC17.28■□□□□ 0.36
RC3H1Q5TC82 SAP18P2-201ENST00000434334 459 ntBASIC17.28■□□□□ 0.36
RC3H1Q5TC82 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RC3H1Q5TC82 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 RBP4-203ENST00000371469 814 ntTSL 5 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AC007679.1-201ENST00000458609 502 ntBASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AC022447.5-201ENST00000504817 392 ntBASIC17.27■□□□□ 0.36
RC3H1Q5TC82 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 MYL6-215ENST00000549566 685 ntTSL 2 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 RN7SL478P-201ENST00000584358 298 ntBASIC17.27■□□□□ 0.36
RC3H1Q5TC82 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RC3H1Q5TC82 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 AC068587.6-202ENST00000641839 5619 ntBASIC17.27■□□□□ 0.35
RC3H1Q5TC82 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RC3H1Q5TC82 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 BX640514.1-201ENST00000583223 1918 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 TUBB2BP1-201ENST00000404155 871 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 RFNG-202ENST00000429557 994 ntTSL 5 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 AL356000.1-201ENST00000441073 1238 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 CDKN2A-AS1-201ENST00000441769 823 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 UGT1A12P-201ENST00000447084 853 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 B9D1-206ENST00000461069 923 ntTSL 2 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 AC113398.1-201ENST00000464124 406 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 PIGCP1-201ENST00000527583 895 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 CLPP-205ENST00000596605 646 ntTSL 2 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 MDC1-209ENST00000613547 830 ntTSL 5 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 CR392039.2-201ENST00000623182 509 ntBASIC17.26■□□□□ 0.35
RC3H1Q5TC82 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 COG6-212ENST00000630730 186 ntTSL 5 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RC3H1Q5TC82 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms