Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.68□□□□□ -0.06
MMP13P45452 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
MMP13P45452 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 AL451050.2-201ENST00000606967 682 ntBASIC14.68□□□□□ -0.06
MMP13P45452 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
MMP13P45452 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP13P45452 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
MMP13P45452 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
MMP13P45452 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
MMP13P45452 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 Z98257.2-202ENST00000641138 1548 ntBASIC14.67□□□□□ -0.06
MMP13P45452 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
MMP13P45452 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 MARK2P5-201ENST00000507649 634 ntBASIC14.67□□□□□ -0.06
MMP13P45452 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 AC140658.4-201ENST00000561990 352 ntBASIC14.67□□□□□ -0.06
MMP13P45452 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP13P45452 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP13P45452 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP13P45452 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP13P45452 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MMP13P45452 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MMP13P45452 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MMP13P45452 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MMP13P45452 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MMP13P45452 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms