Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 AC093433.1-201ENST00000458048 571 ntBASIC9.58□□□□□ -0.88
CXCL5P42830 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC9.58□□□□□ -0.88
CXCL5P42830 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 AC027601.3-201ENST00000622907 509 ntBASIC9.58□□□□□ -0.88
CXCL5P42830 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 AP000437.1-201ENST00000624057 2085 ntBASIC9.58□□□□□ -0.88
CXCL5P42830 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC9.58□□□□□ -0.88
CXCL5P42830 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC9.58□□□□□ -0.88
CXCL5P42830 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CXCL5P42830 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
CXCL5P42830 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.88
CXCL5P42830 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 CCT7P1-201ENST00000406551 1611 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
CXCL5P42830 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.88
CXCL5P42830 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 GUK1-206ENST00000366723 845 ntTSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 EDF1-203ENST00000371649 790 ntTSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
CXCL5P42830 HNRNPA1P27-201ENST00000412087 955 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 HNRNPA1P40-201ENST00000426371 1278 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 URGCP-206ENST00000446958 365 ntTSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 KRT18P15-201ENST00000458108 1291 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC9.57□□□□□ -0.88
CXCL5P42830 RNA5SP421-201ENST00000516864 134 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 PTP4A1P2-201ENST00000546033 454 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 AC106820.3-201ENST00000561653 397 ntBASIC9.57□□□□□ -0.88
CXCL5P42830 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CXCL5P42830 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC9.57□□□□□ -0.88
CXCL5P42830 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC9.57□□□□□ -0.88
CXCL5P42830 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC9.57□□□□□ -0.88
CXCL5P42830 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CXCL5P42830 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms