Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 MARK2P9-201ENST00000430958 1727 ntBASIC13.25□□□□□ -0.29
CHMP24386 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.24□□□□□ -0.29
CHMP24386 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CHMP24386 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.24□□□□□ -0.29
CHMP24386 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 KRT8P28-201ENST00000433288 1390 ntBASIC13.24□□□□□ -0.29
CHMP24386 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.24□□□□□ -0.29
CHMP24386 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CHMP24386 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 USP17L6P-201ENST00000382470 1197 ntBASIC13.24□□□□□ -0.29
CHMP24386 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.24□□□□□ -0.29
CHMP24386 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 AC044849.1-201ENST00000519737 1188 ntBASIC13.24□□□□□ -0.29
CHMP24386 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.24□□□□□ -0.29
CHMP24386 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 AC013355.1-201ENST00000562625 723 ntBASIC13.24□□□□□ -0.29
CHMP24386 AC005586.2-201ENST00000563946 837 ntBASIC13.24□□□□□ -0.29
CHMP24386 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.24□□□□□ -0.29
CHMP24386 KRT18P8-201ENST00000581937 1246 ntBASIC13.24□□□□□ -0.29
CHMP24386 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 AL451050.2-201ENST00000606967 682 ntBASIC13.24□□□□□ -0.29
CHMP24386 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 AC068587.8-201ENST00000641239 219 ntBASIC13.24□□□□□ -0.29
CHMP24386 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CHMP24386 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.24□□□□□ -0.29
CHMP24386 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHMP24386 DMBT1P1-203ENST00000636837 4628 ntBASIC13.24□□□□□ -0.29
CHMP24386 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CHMP24386 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 BCYRN1-201ENST00000418539 200 ntBASIC13.23□□□□□ -0.29
CHMP24386 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 NKAIN1P1-201ENST00000435754 582 ntBASIC13.23□□□□□ -0.29
CHMP24386 AL645933.1-201ENST00000440087 609 ntBASIC13.23□□□□□ -0.29
CHMP24386 KLF2P1-201ENST00000447438 1042 ntBASIC13.23□□□□□ -0.29
CHMP24386 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 EIF4HP1-201ENST00000453115 687 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms