Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TPM2P07951 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TPM2P07951 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.13■□□□□ 0.17
TPM2P07951 UGT1A2P-201ENST00000454886 866 ntBASIC16.13■□□□□ 0.17
TPM2P07951 CYMP-203ENST00000474680 1263 ntBASIC16.13■□□□□ 0.17
TPM2P07951 ALG3P1-201ENST00000508806 1114 ntBASIC16.13■□□□□ 0.17
TPM2P07951 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM2P07951 RN7SL48P-201ENST00000579283 293 ntBASIC16.13■□□□□ 0.17
TPM2P07951 AC008494.3-201ENST00000606615 944 ntBASIC16.13■□□□□ 0.17
TPM2P07951 AP001002.3-201ENST00000623482 206 ntBASIC16.13■□□□□ 0.17
TPM2P07951 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TPM2P07951 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM2P07951 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TPM2P07951 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM2P07951 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TPM2P07951 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM2P07951 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TPM2P07951 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 PUDPP3-201ENST00000445368 636 ntBASIC16.12■□□□□ 0.17
TPM2P07951 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM2P07951 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM2P07951 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TPM2P07951 PTP4A1P2-201ENST00000546033 454 ntBASIC16.12■□□□□ 0.17
TPM2P07951 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
TPM2P07951 AC140912.1-201ENST00000577171 1054 ntBASIC16.12■□□□□ 0.17
TPM2P07951 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.12■□□□□ 0.17
TPM2P07951 WFDC1-204ENST00000613603 549 ntBASIC16.12■□□□□ 0.17
TPM2P07951 AC145423.3-201ENST00000615987 467 ntBASIC16.12■□□□□ 0.17
TPM2P07951 AL033527.5-201ENST00000641382 801 ntBASIC16.12■□□□□ 0.17
TPM2P07951 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TPM2P07951 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM2P07951 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM2P07951 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TPM2P07951 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC16.11■□□□□ 0.17
TPM2P07951 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 TPM3P8-201ENST00000330554 643 ntBASIC16.11■□□□□ 0.17
TPM2P07951 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM2P07951 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM2P07951 MIR770-201ENST00000390219 98 ntBASIC16.11■□□□□ 0.17
TPM2P07951 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
TPM2P07951 BAATP1-201ENST00000412284 1225 ntBASIC16.11■□□□□ 0.17
TPM2P07951 POM121L8P-201ENST00000417732 1281 ntBASIC16.11■□□□□ 0.17
TPM2P07951 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 POM121L9P-203ENST00000441984 1285 ntBASIC16.11■□□□□ 0.17
TPM2P07951 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM2P07951 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TPM2P07951 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.11■□□□□ 0.17
TPM2P07951 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC16.11■□□□□ 0.17
TPM2P07951 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.11■□□□□ 0.17
TPM2P07951 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.11■□□□□ 0.17
TPM2P07951 AC020910.5-201ENST00000623668 1865 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms