Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD74P04233 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD74P04233 MSTO2P-201ENST00000314835 1709 ntBASIC11.86□□□□□ -0.51
CD74P04233 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 DNM1P41-201ENST00000623634 3350 ntBASIC11.85□□□□□ -0.51
CD74P04233 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CD74P04233 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.85□□□□□ -0.51
CD74P04233 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 DFFBP1-201ENST00000433250 979 ntBASIC11.85□□□□□ -0.51
CD74P04233 AL645933.1-201ENST00000440087 609 ntBASIC11.85□□□□□ -0.51
CD74P04233 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 AC093028.1-201ENST00000622998 982 ntBASIC11.85□□□□□ -0.51
CD74P04233 AL161773.1-201ENST00000624845 863 ntBASIC11.85□□□□□ -0.51
CD74P04233 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 DDX12P-201ENST00000432996 2947 ntBASIC11.85□□□□□ -0.51
CD74P04233 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 AC124319.4-201ENST00000622931 2161 ntBASIC11.85□□□□□ -0.51
CD74P04233 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.85□□□□□ -0.51
CD74P04233 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CD74P04233 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD74P04233 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 AL136309.1-201ENST00000403917 691 ntBASIC11.84□□□□□ -0.51
CD74P04233 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.84□□□□□ -0.51
CD74P04233 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.84□□□□□ -0.51
CD74P04233 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 AC124068.2-201ENST00000569473 1109 ntBASIC11.84□□□□□ -0.51
CD74P04233 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.84□□□□□ -0.51
CD74P04233 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.84□□□□□ -0.51
CD74P04233 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.84□□□□□ -0.51
CD74P04233 AC132938.4-201ENST00000623835 848 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms