Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 KRT18P15-201ENST00000458108 1291 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 PTP4A1P2-201ENST00000546033 454 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 AL512310.5-201ENST00000551999 515 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 AC008825.2-201ENST00000603374 718 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 AC008494.3-201ENST00000606615 944 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 REXO1L6P-201ENST00000603433 1515 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 PI4KAP2-201ENST00000360806 2080 ntBASIC12.09□□□□□ -0.47
TMEM235A6NFC5 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.09□□□□□ -0.47
TMEM235A6NFC5 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.08□□□□□ -0.47
TMEM235A6NFC5 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM235A6NFC5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM235A6NFC5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM235A6NFC5 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
TMEM235A6NFC5 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AGGF1P10-201ENST00000635005 2191 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 CCT8L1P-201ENST00000465400 1674 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 HMGA1P1-201ENST00000415560 1062 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 FAM8A4P-201ENST00000435433 1213 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AL590640.2-201ENST00000457038 527 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AC106760.1-201ENST00000508690 800 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 SERBP1P5-201ENST00000510079 1181 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 LINC02084-201ENST00000606069 1096 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AL358472.3-201ENST00000608147 415 ntBASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TMEM235A6NFC5 AL021155.1-201ENST00000438808 2637 ntBASIC12.07□□□□□ -0.48
TMEM235A6NFC5 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM235A6NFC5 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM235A6NFC5 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TMEM235A6NFC5 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM235A6NFC5 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.07□□□□□ -0.48
TMEM235A6NFC5 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TMEM235A6NFC5 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms