Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 PCDHA5-203ENST00000614258 4248 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 NCLP1-201ENST00000445357 1963 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 AL022323.5-201ENST00000624101 2059 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 AC026954.1-201ENST00000429771 1293 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 CTBP2P5-201ENST00000454986 1264 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 AC005225.4-201ENST00000557330 545 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 AL162274.1-201ENST00000617191 1098 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 AC105233.6-201ENST00000642093 218 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
IFT52Q9Y366 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.29□□□□□ -0.28
IFT52Q9Y366 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.28□□□□□ -0.28
IFT52Q9Y366 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 HMGA1P1-201ENST00000415560 1062 ntBASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC022217.1-201ENST00000521069 738 ntBASIC13.28□□□□□ -0.28
IFT52Q9Y366 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 Z98259.2-201ENST00000641583 609 ntBASIC13.28□□□□□ -0.28
IFT52Q9Y366 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AL590824.1-201ENST00000403828 1349 ntBASIC13.28□□□□□ -0.28
IFT52Q9Y366 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 AC007952.5-201ENST00000572818 1486 ntBASIC13.28□□□□□ -0.28
IFT52Q9Y366 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IFT52Q9Y366 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFT52Q9Y366 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms