Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 AL356000.1-201ENST00000441073 1238 ntBASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 ACY3-202ENST00000529256 933 ntTSL 3 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 AP003040.1-201ENST00000532044 1024 ntBASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 INO80E-209ENST00000567254 625 ntTSL 2 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 AL008638.4-201ENST00000624792 1315 ntBASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 CA6-205ENST00000480186 1493 ntTSL 2 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 SLC25A51P3-201ENST00000521814 889 ntBASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 IGHVII-33-1-201ENST00000524010 280 ntBASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 AC023794.5-201ENST00000564380 2157 ntBASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC20.22■□□□□ 0.83
SHANK2Q9UPX8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 TREX1-203ENST00000456089 629 ntTSL 3 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 RN7SL173P-201ENST00000461853 292 ntBASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 AC099328.1-201ENST00000498809 1030 ntBASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 AC211476.2-201ENST00000608799 708 ntBASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 DUX4L33-201ENST00000635217 958 ntBASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 MKRN7P-201ENST00000433469 1371 ntBASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHANK2Q9UPX8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 CR383656.2-201ENST00000548656 2254 ntBASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AC011431.1-201ENST00000512971 230 ntBASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 MIR6893-201ENST00000613458 69 ntBASIC20.2■□□□□ 0.82
SHANK2Q9UPX8 AC005746.3-201ENST00000614751 393 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms