Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC092580.1-201ENST00000433998 658 ntBASIC14.11□□□□□ -0.15
SPASTQ9UBP0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 RN7SL81P-201ENST00000493781 261 ntBASIC14.11□□□□□ -0.15
SPASTQ9UBP0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 SORD2P-201ENST00000558556 1069 ntBASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC135983.4-201ENST00000564116 1262 ntBASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AL359881.3-201ENST00000602640 1721 ntBASIC14.11□□□□□ -0.15
SPASTQ9UBP0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AP003419.4-201ENST00000616071 517 ntBASIC14.11□□□□□ -0.15
SPASTQ9UBP0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPASTQ9UBP0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AC007881.3-201ENST00000608897 607 ntBASIC14.1□□□□□ -0.15
SPASTQ9UBP0 YRDCP1-201ENST00000621419 643 ntBASIC14.1□□□□□ -0.15
SPASTQ9UBP0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms