Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MIR663B-201ENST00000408361 115 ntBASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AGER-214ENST00000538695 487 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AC009542.2-202ENST00000619004 1067 ntBASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AL162426.1-201ENST00000624141 743 ntBASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 GOLGA8VP-201ENST00000559009 1798 ntBASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TCAM1P-207ENST00000485295 1537 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 USP17L6P-201ENST00000382470 1197 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AL157407.1-201ENST00000435784 904 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 BNIP3P42-201ENST00000454982 569 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 RPL13AP20-201ENST00000459725 609 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 RPSAP36-202ENST00000494591 1261 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC119751.2-201ENST00000504529 210 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC005740.2-201ENST00000511085 419 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 FAM86HP-204ENST00000513466 959 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC104982.3-201ENST00000581995 514 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 489.5 ms