Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.52■□□□□ 0.23
STAG1Q8WVM7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.52■□□□□ 0.23
STAG1Q8WVM7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
STAG1Q8WVM7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.52■□□□□ 0.23
STAG1Q8WVM7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 SNORA50C-201ENST00000408535 133 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC005722.1-201ENST00000431878 964 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 EEF1DP2-201ENST00000433698 843 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC104784.1-201ENST00000473096 294 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 OR5BD1P-201ENST00000532527 817 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC025262.2-201ENST00000623975 1056 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 SNORA50.1-201ENST00000628590 135 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 ODCP-201ENST00000459650 1639 ntBASIC16.51■□□□□ 0.23
STAG1Q8WVM7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.51■□□□□ 0.23
STAG1Q8WVM7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 GRPEL2P1-201ENST00000453145 339 ntBASIC16.5■□□□□ 0.23
STAG1Q8WVM7 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 RN7SL564P-201ENST00000496309 250 ntBASIC16.5■□□□□ 0.23
STAG1Q8WVM7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 AP005264.5-201ENST00000590066 467 ntBASIC16.5■□□□□ 0.23
STAG1Q8WVM7 AL049840.2-201ENST00000602722 535 ntBASIC16.5■□□□□ 0.23
STAG1Q8WVM7 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.5■□□□□ 0.23
STAG1Q8WVM7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 PES1P2-201ENST00000449745 1735 ntBASIC16.5■□□□□ 0.23
STAG1Q8WVM7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
STAG1Q8WVM7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 FAM90A12P-201ENST00000519497 2375 ntBASIC16.49■□□□□ 0.23
STAG1Q8WVM7 FAM90A24P-201ENST00000520792 2369 ntBASIC16.49■□□□□ 0.23
STAG1Q8WVM7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms