Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 COQ4-202ENST00000372875 928 ntTSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC004884.1-201ENST00000393647 319 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC103810.4-201ENST00000578601 257 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC005336.1-201ENST00000585431 1243 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 POR-201ENST00000394893 2532 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 CICP24-201ENST00000605464 2705 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MIR1249-201ENST00000408671 66 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC007312.1-201ENST00000427493 258 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 RN7SL452P-201ENST00000482923 291 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MTND6P4-201ENST00000506002 522 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 GAPDHP76-201ENST00000512278 976 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 RN7SL750P-201ENST00000582814 238 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AHCYP7-201ENST00000560847 1308 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC131274.3-201ENST00000578745 1271 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MIR4526-201ENST00000583168 87 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 PIGCP1-201ENST00000527583 895 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms