Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.65□□□□□ -0.38
CLRN1P58418 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.65□□□□□ -0.38
CLRN1P58418 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.65□□□□□ -0.38
CLRN1P58418 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.65□□□□□ -0.38
CLRN1P58418 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.65□□□□□ -0.38
CLRN1P58418 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.65□□□□□ -0.38
CLRN1P58418 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.65□□□□□ -0.38
CLRN1P58418 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.65□□□□□ -0.38
CLRN1P58418 RN7SL277P-201ENST00000481521 288 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 RCC2P8-201ENST00000502779 1035 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 AC044849.1-201ENST00000519737 1188 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.65□□□□□ -0.38
CLRN1P58418 AL157813.1-201ENST00000612996 587 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 AL008638.5-201ENST00000623814 1298 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.65□□□□□ -0.38
CLRN1P58418 AL033527.4-201ENST00000641026 673 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.65□□□□□ -0.38
CLRN1P58418 AC018735.1-201ENST00000437208 1502 ntBASIC12.65□□□□□ -0.38
CLRN1P58418 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.65□□□□□ -0.38
CLRN1P58418 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.65□□□□□ -0.38
CLRN1P58418 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLRN1P58418 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLRN1P58418 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLRN1P58418 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLRN1P58418 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CLRN1P58418 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CLRN1P58418 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLRN1P58418 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLRN1P58418 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.65□□□□□ -0.39
CLRN1P58418 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.64□□□□□ -0.39
CLRN1P58418 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.64□□□□□ -0.39
CLRN1P58418 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 GOLGA2P8-201ENST00000505201 779 ntBASIC12.64□□□□□ -0.39
CLRN1P58418 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.64□□□□□ -0.39
CLRN1P58418 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 AL118558.3-201ENST00000607414 1079 ntBASIC12.64□□□□□ -0.39
CLRN1P58418 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 AL365181.3-201ENST00000605886 3222 ntBASIC12.64□□□□□ -0.39
CLRN1P58418 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.64□□□□□ -0.39
CLRN1P58418 AL139158.3-201ENST00000641212 1562 ntBASIC12.64□□□□□ -0.39
CLRN1P58418 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.64□□□□□ -0.39
CLRN1P58418 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLRN1P58418 SHMT1P1-201ENST00000419974 1312 ntBASIC12.63□□□□□ -0.39
CLRN1P58418 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLRN1P58418 AC073548.1-201ENST00000624088 1882 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms