Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SSR1P43307 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.13■□□□□ 0.01
SSR1P43307 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.13■□□□□ 0.01
SSR1P43307 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.13■□□□□ 0.01
SSR1P43307 AC005034.1-201ENST00000426657 489 ntBASIC15.13■□□□□ 0.01
SSR1P43307 AL157407.1-201ENST00000435784 904 ntBASIC15.13■□□□□ 0.01
SSR1P43307 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 AL645933.1-201ENST00000440087 609 ntBASIC15.13■□□□□ 0.01
SSR1P43307 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.13■□□□□ 0.01
SSR1P43307 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.13■□□□□ 0.01
SSR1P43307 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.13■□□□□ 0.01
SSR1P43307 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.13■□□□□ 0.01
SSR1P43307 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.13■□□□□ 0.01
SSR1P43307 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.13■□□□□ 0.01
SSR1P43307 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.13■□□□□ 0.01
SSR1P43307 AL162274.1-201ENST00000617191 1098 ntBASIC15.13■□□□□ 0.01
SSR1P43307 AC008687.7-202ENST00000637404 953 ntBASIC15.13■□□□□ 0.01
SSR1P43307 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.13■□□□□ 0.01
SSR1P43307 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.13■□□□□ 0.01
SSR1P43307 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSR1P43307 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 BX324167.2-201ENST00000623717 3316 ntBASIC15.12■□□□□ 0.01
SSR1P43307 AL928654.5-201ENST00000624831 2501 ntBASIC15.12■□□□□ 0.01
SSR1P43307 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 AC072061.1-201ENST00000569710 2234 ntBASIC15.12■□□□□ 0.01
SSR1P43307 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SSR1P43307 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 AL445209.1-201ENST00000607269 3491 ntBASIC15.12■□□□□ 0.01
SSR1P43307 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.12■□□□□ 0.01
SSR1P43307 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 GAPDHP21-201ENST00000450301 1010 ntBASIC15.12■□□□□ 0.01
SSR1P43307 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.12■□□□□ 0.01
SSR1P43307 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.12■□□□□ 0.01
SSR1P43307 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.12■□□□□ 0.01
SSR1P43307 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.12■□□□□ 0.01
SSR1P43307 AC005962.1-201ENST00000584100 773 ntBASIC15.12■□□□□ 0.01
SSR1P43307 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 AC009884.2-201ENST00000603110 324 ntBASIC15.12■□□□□ 0.01
SSR1P43307 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 MAPK10-262ENST00000641051 5738 ntBASIC15.12■□□□□ 0.01
SSR1P43307 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.12■□□□□ 0.01
SSR1P43307 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.12■□□□□ 0.01
SSR1P43307 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSR1P43307 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 AC106818.1-201ENST00000623223 3242 ntBASIC15.11■□□□□ 0.01
SSR1P43307 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SSR1P43307 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SSR1P43307 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 AC005014.1-201ENST00000432006 2976 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms