Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ERCC2P18074 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC2P18074 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC2P18074 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 RN7SL258P-201ENST00000478664 300 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 AC008723.1-201ENST00000506922 207 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC2P18074 AC114947.1-202ENST00000514136 344 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ERCC2P18074 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 MIR3619-201ENST00000579667 83 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 AC020922.3-201ENST00000595064 547 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 AL133467.4-201ENST00000602953 725 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.49□□□□□ -0.09
ERCC2P18074 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ERCC2P18074 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ERCC2P18074 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 AL133338.1-201ENST00000565695 1517 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.49□□□□□ -0.09
ERCC2P18074 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC2P18074 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.49□□□□□ -0.09
ERCC2P18074 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 AC093462.1-201ENST00000621167 1683 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 MIR645-201ENST00000385283 94 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 AL353637.1-201ENST00000451571 732 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.48□□□□□ -0.09
ERCC2P18074 NUP210P1-202ENST00000504322 710 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.48□□□□□ -0.09
ERCC2P18074 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.48□□□□□ -0.09
ERCC2P18074 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.48□□□□□ -0.09
ERCC2P18074 RN7SL574P-201ENST00000581512 297 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 MIR4754-201ENST00000582477 89 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 AL139099.5-201ENST00000635274 300 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 AC025183.3-201ENST00000623526 1482 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ERCC2P18074 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
ERCC2P18074 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC2P18074 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.48□□□□□ -0.09
ERCC2P18074 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC2P18074 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
ERCC2P18074 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC2P18074 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms