Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.19□□□□□ -0.46
ACAA1P09110 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ACAA1P09110 MIR663B-201ENST00000408361 115 ntBASIC12.19□□□□□ -0.46
ACAA1P09110 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.19□□□□□ -0.46
ACAA1P09110 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.19□□□□□ -0.46
ACAA1P09110 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.19□□□□□ -0.46
ACAA1P09110 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.19□□□□□ -0.46
ACAA1P09110 AL512310.5-201ENST00000551999 515 ntBASIC12.19□□□□□ -0.46
ACAA1P09110 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.19□□□□□ -0.46
ACAA1P09110 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.19□□□□□ -0.46
ACAA1P09110 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.19□□□□□ -0.46
ACAA1P09110 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.19□□□□□ -0.46
ACAA1P09110 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.19□□□□□ -0.46
ACAA1P09110 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.19□□□□□ -0.46
ACAA1P09110 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ACAA1P09110 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.19□□□□□ -0.46
ACAA1P09110 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
ACAA1P09110 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ACAA1P09110 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 AL591846.1-201ENST00000451736 433 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 AC021723.1-201ENST00000486306 515 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 AC006122.1-201ENST00000493323 440 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 FAM8A2P-201ENST00000528813 1142 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 AL096828.3-201ENST00000615354 462 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ACAA1P09110 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.18□□□□□ -0.46
ACAA1P09110 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 KRT8P29-201ENST00000420409 1371 ntBASIC12.18□□□□□ -0.46
ACAA1P09110 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.18□□□□□ -0.46
ACAA1P09110 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACAA1P09110 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACAA1P09110 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACAA1P09110 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACAA1P09110 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACAA1P09110 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACAA1P09110 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms