Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.99□□□□□ -0.49
CD3DP04234 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.99□□□□□ -0.49
CD3DP04234 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.99□□□□□ -0.49
CD3DP04234 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.99□□□□□ -0.49
CD3DP04234 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 AC134684.3-201ENST00000641758 218 ntBASIC11.99□□□□□ -0.49
CD3DP04234 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 LAP3P2-201ENST00000454686 1454 ntBASIC11.99□□□□□ -0.49
CD3DP04234 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.99□□□□□ -0.49
CD3DP04234 ZNF493-208ENST00000599461 1769 ntBASIC11.99□□□□□ -0.49
CD3DP04234 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
CD3DP04234 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.99□□□□□ -0.49
CD3DP04234 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.98□□□□□ -0.49
CD3DP04234 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CD3DP04234 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 SLC7A15P-201ENST00000424028 1363 ntBASIC11.98□□□□□ -0.49
CD3DP04234 AL590824.1-201ENST00000403828 1349 ntBASIC11.98□□□□□ -0.49
CD3DP04234 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.98□□□□□ -0.49
CD3DP04234 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CD3DP04234 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.98□□□□□ -0.49
CD3DP04234 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 AC106820.3-201ENST00000561653 397 ntBASIC11.98□□□□□ -0.49
CD3DP04234 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
CD3DP04234 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.98□□□□□ -0.49
CD3DP04234 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.98□□□□□ -0.49
CD3DP04234 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.98□□□□□ -0.49
CD3DP04234 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.98□□□□□ -0.49
CD3DP04234 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.98□□□□□ -0.49
CD3DP04234 RN7SL48P-201ENST00000579283 293 ntBASIC11.98□□□□□ -0.49
CD3DP04234 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
CD3DP04234 AC021016.3-201ENST00000608367 477 ntBASIC11.98□□□□□ -0.49
CD3DP04234 AC145423.3-201ENST00000615987 467 ntBASIC11.98□□□□□ -0.49
CD3DP04234 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.98□□□□□ -0.49
CD3DP04234 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.98□□□□□ -0.49
CD3DP04234 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD3DP04234 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms