Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AC011742.3-201ENST00000439053 820 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 ATP5G2P4-201ENST00000442175 420 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 EIF4HP1-201ENST00000453115 687 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AC009779.1-201ENST00000551138 283 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 MIR3615-201ENST00000581999 87 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AL356585.2-201ENST00000625078 2396 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 AC025183.3-201ENST00000623526 1482 ntBASIC11.38□□□□□ -0.59
SRRM4A7MD48 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SRRM4A7MD48 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SRRM4A7MD48 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AC008620.2-201ENST00000510294 1569 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL139158.3-201ENST00000641212 1562 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 BRD7P5-201ENST00000299197 1822 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 LINC00638-201ENST00000555578 2518 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 RN7SL277P-201ENST00000481521 288 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 FAM8A2P-201ENST00000528813 1142 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL132994.2-201ENST00000603120 687 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL157813.1-201ENST00000612996 587 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 AL136295.7-201ENST00000619226 1200 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms