Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 KRT18P15-201ENST00000458108 1291 ntBASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 TCAF1P1-201ENST00000414990 2232 ntBASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 MEX3B-202ENST00000558133 4333 ntBASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PARPBPQ9NWS1 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 AC007952.5-201ENST00000572818 1486 ntBASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 FRMPD2B-201ENST00000431305 1347 ntBASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 AL161670.2-201ENST00000557650 1227 ntBASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 AC099521.3-201ENST00000624251 2938 ntBASIC12.72□□□□□ -0.37
PARPBPQ9NWS1 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms