Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 FNTAP2-201ENST00000430308 634 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 LDHBP3-201ENST00000514909 822 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 AC020978.7-201ENST00000575953 1187 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 AL132994.2-201ENST00000603120 687 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 AC020923.1-201ENST00000624021 917 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
USB1Q9BQ65 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
USB1Q9BQ65 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
USB1Q9BQ65 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
USB1Q9BQ65 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
USB1Q9BQ65 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
USB1Q9BQ65 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
USB1Q9BQ65 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
USB1Q9BQ65 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC009093.2-202ENST00000620513 2079 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AL662890.1-201ENST00000396818 632 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC112206.4-201ENST00000515142 405 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC005730.2-201ENST00000564549 1184 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC090164.2-201ENST00000611487 516 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 AC068587.8-201ENST00000641239 219 ntBASIC12.89□□□□□ -0.35
USB1Q9BQ65 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms