Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 KRT8P4-201ENST00000509735 1454 ntBASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AC009093.10-201ENST00000641956 1442 ntBASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AC079776.1-201ENST00000401540 1152 ntBASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 GPR53P-205ENST00000457298 1084 ntBASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AC104989.1-201ENST00000519711 778 ntBASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 PPY2P-201ENST00000582808 702 ntBASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.96□□□□□ -0.49
RTN4IP1Q8WWV3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 AL359845.1-201ENST00000458202 1648 ntBASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 LINC00567-201ENST00000569854 3409 ntBASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTN4IP1Q8WWV3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC024075.2-201ENST00000598112 1473 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AL355102.3-201ENST00000554299 1678 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 DLX4-206ENST00000611342 1662 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC026954.1-201ENST00000429771 1293 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CNN2P10-201ENST00000443067 918 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 HOMER2P2-201ENST00000451621 847 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms