Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AL355864.2-201ENST00000447420 863 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 CRB3P1-201ENST00000449338 276 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 RN7SL752P-201ENST00000463779 287 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 SORD2P-201ENST00000558556 1069 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AC010970.1-201ENST00000445125 1848 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AL138709.1-201ENST00000614840 1693 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AC009093.2-202ENST00000620513 2079 ntBASIC12.31□□□□□ -0.44
CCDC107Q8WV48 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 RN7SL48P-201ENST00000579283 293 ntBASIC12.3□□□□□ -0.44
CCDC107Q8WV48 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ECM1P1-201ENST00000604092 1279 ntBASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 RPSAP52-203ENST00000622976 1023 ntBASIC12.3□□□□□ -0.44
CCDC107Q8WV48 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 AC107375.1-201ENST00000564464 2231 ntBASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC107Q8WV48 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCDC107Q8WV48 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC107Q8WV48 AC139712.1-201ENST00000378256 1875 ntBASIC12.29□□□□□ -0.44
CCDC107Q8WV48 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCDC107Q8WV48 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC107Q8WV48 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms