Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AL121992.3-201ENST00000606186 346 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AL117379.1-201ENST00000619319 677 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 CARS-216ENST00000639317 135 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 NBEAP3-201ENST00000420638 1493 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC007279.1-201ENST00000448547 837 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC104581.4-201ENST00000623126 3052 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 ACP1-207ENST00000439645 605 ntTSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AL391822.1-201ENST00000452580 562 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 METTL23-211ENST00000589977 617 ntTSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC099795.2-201ENST00000639582 440 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 HSPA8P5-201ENST00000456928 2069 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC124944.3-201ENST00000607976 1304 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 PI4KAP2-201ENST00000360806 2080 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 CACYBPP3-201ENST00000406011 625 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 RN7SL148P-201ENST00000467120 279 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 DNM1P50-201ENST00000565767 508 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 SNORD55-201ENST00000581525 80 ntBASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
ALMS1Q8TCU4 AC097359.2-201ENST00000604992 2389 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms