Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 KRT18P46-201ENST00000435568 1279 ntBASIC21.55■■□□□ 1.04
VPS8Q8N3P4 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 MIR4472-1-201ENST00000584349 80 ntBASIC21.55■■□□□ 1.04
VPS8Q8N3P4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 GCSHP3-201ENST00000431120 391 ntBASIC21.55■■□□□ 1.04
VPS8Q8N3P4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 AC008026.2-201ENST00000495438 348 ntBASIC21.55■■□□□ 1.04
VPS8Q8N3P4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 AC087203.1-201ENST00000532111 1181 ntBASIC21.55■■□□□ 1.04
VPS8Q8N3P4 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS8Q8N3P4 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 AC007336.3-201ENST00000623886 2160 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 BCAS2P2-201ENST00000425064 674 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 AC097065.1-201ENST00000425737 517 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 RPL13AP19-201ENST00000434320 584 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 RPL29P2-202ENST00000498671 657 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 AC009084.3-201ENST00000623356 437 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 HLA-C-210ENST00000640219 976 ntBASIC21.54■■□□□ 1.04
VPS8Q8N3P4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS8Q8N3P4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 RNA5SP491-201ENST00000362936 118 ntBASIC21.53■■□□□ 1.04
VPS8Q8N3P4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS8Q8N3P4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms