Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC020658.7-201ENST00000624274 2442 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC239868.1-201ENST00000369385 493 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 IMP3P2-201ENST00000489760 475 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC005740.1-201ENST00000515639 522 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AL589935.2-201ENST00000616471 1231 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC138627.1-207ENST00000641560 1006 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC093462.1-201ENST00000621167 1683 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC067931.2-201ENST00000623655 2003 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.79□□□□□ -0.36
ATG4DQ86TL0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.79□□□□□ -0.36
ATG4DQ86TL0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC091046.1-201ENST00000331871 207 ntBASIC12.78□□□□□ -0.36
ATG4DQ86TL0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC006987.1-201ENST00000413610 527 ntBASIC12.78□□□□□ -0.36
ATG4DQ86TL0 BX679664.3-201ENST00000414070 555 ntBASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC113935.1-201ENST00000471722 555 ntBASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 RNA5SP423-201ENST00000517127 109 ntBASIC12.78□□□□□ -0.36
ATG4DQ86TL0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms