Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 DUX4L33-201ENST00000635217 958 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 BEND3P1-201ENST00000421591 1944 ntBASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42BPAQ5VT25 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 SRP9P1-201ENST00000445874 261 ntBASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 MIR6893-201ENST00000613458 69 ntBASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42BPAQ5VT25 CCL25-202ENST00000315626 450 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AP000346.2-202ENST00000425948 383 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 IQCF4-203ENST00000428561 420 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 RN7SL22P-201ENST00000471800 269 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AC133555.4-201ENST00000569081 152 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AL078624.1-201ENST00000604004 547 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AC008038.1-201ENST00000634247 1314 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AC005089.1-201ENST00000619486 2241 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AL031577.1-201ENST00000339867 399 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 ASS1P1-201ENST00000402854 1237 ntBASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms