Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC134312.5-201ENST00000568031 1313 ntBASIC11.63□□□□□ -0.55
SUPT4H1P63272 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 BAATP1-201ENST00000412284 1225 ntBASIC11.63□□□□□ -0.55
SUPT4H1P63272 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 ELK1P1-201ENST00000485699 580 ntBASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 AC008764.8-201ENST00000623966 2717 ntBASIC11.63□□□□□ -0.55
SUPT4H1P63272 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.63□□□□□ -0.55
SUPT4H1P63272 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SUPT4H1P63272 KRT18P28-201ENST00000453838 1332 ntBASIC11.62□□□□□ -0.55
SUPT4H1P63272 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 FAM8A4P-201ENST00000435433 1213 ntBASIC11.62□□□□□ -0.55
SUPT4H1P63272 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CTBP2P3-201ENST00000585629 1255 ntBASIC11.62□□□□□ -0.55
SUPT4H1P63272 CHCHD2P3-201ENST00000603038 451 ntBASIC11.62□□□□□ -0.55
SUPT4H1P63272 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CTAGE10P-201ENST00000318353 2408 ntBASIC11.62□□□□□ -0.55
SUPT4H1P63272 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SUPT4H1P63272 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.62□□□□□ -0.55
SUPT4H1P63272 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SUPT4H1P63272 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SUPT4H1P63272 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms