Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17■□□□□ 0.31
NUP98P52948 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 SRL-202ENST00000537996 1814 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.99■□□□□ 0.31
NUP98P52948 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
NUP98P52948 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC16.99■□□□□ 0.31
NUP98P52948 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.99■□□□□ 0.31
NUP98P52948 AC147876.1-201ENST00000504408 322 ntBASIC16.99■□□□□ 0.31
NUP98P52948 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.99■□□□□ 0.31
NUP98P52948 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
NUP98P52948 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC16.99■□□□□ 0.31
NUP98P52948 RN7SL524P-201ENST00000581152 300 ntBASIC16.99■□□□□ 0.31
NUP98P52948 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.99■□□□□ 0.31
NUP98P52948 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.99■□□□□ 0.31
NUP98P52948 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NUP98P52948 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
NUP98P52948 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 AC007336.3-201ENST00000623886 2160 ntBASIC16.99■□□□□ 0.31
NUP98P52948 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.99■□□□□ 0.31
NUP98P52948 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUP98P52948 AC020917.4-201ENST00000623994 1999 ntBASIC16.99■□□□□ 0.31
NUP98P52948 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 AC073869.1-201ENST00000415574 2762 ntBASIC16.98■□□□□ 0.31
NUP98P52948 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC16.98■□□□□ 0.31
NUP98P52948 RPE-208ENST00000436630 1128 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 KRT8P38-201ENST00000441370 1430 ntBASIC16.98■□□□□ 0.31
NUP98P52948 SNORA47-201ENST00000458862 138 ntBASIC16.98■□□□□ 0.31
NUP98P52948 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.98■□□□□ 0.31
NUP98P52948 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 AC020922.4-201ENST00000621389 339 ntBASIC16.98■□□□□ 0.31
NUP98P52948 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 PI4KAP2-201ENST00000360806 2080 ntBASIC16.98■□□□□ 0.31
NUP98P52948 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 AL031587.5-201ENST00000624344 1849 ntBASIC16.98■□□□□ 0.31
NUP98P52948 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP98P52948 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 AC114812.4-201ENST00000506676 757 ntBASIC16.98■□□□□ 0.31
NUP98P52948 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.98■□□□□ 0.31
NUP98P52948 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.98■□□□□ 0.31
NUP98P52948 AC009041.4-201ENST00000620075 638 ntBASIC16.98■□□□□ 0.31
NUP98P52948 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NUP98P52948 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP98P52948 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP98P52948 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUP98P52948 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NUP98P52948 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.97■□□□□ 0.31
NUP98P52948 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP98P52948 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NUP98P52948 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NUP98P52948 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP98P52948 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP98P52948 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms