Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.72□□□□□ -0.37
ATRXP46100 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ATRXP46100 KRT8P38-201ENST00000441370 1430 ntBASIC12.72□□□□□ -0.37
ATRXP46100 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATRXP46100 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 AKR1B1P4-201ENST00000426552 922 ntBASIC12.71□□□□□ -0.37
ATRXP46100 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC12.71□□□□□ -0.37
ATRXP46100 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.71□□□□□ -0.37
ATRXP46100 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC12.71□□□□□ -0.37
ATRXP46100 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.71□□□□□ -0.37
ATRXP46100 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 KRT18P45-201ENST00000515347 1333 ntBASIC12.71□□□□□ -0.37
ATRXP46100 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ATRXP46100 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
ATRXP46100 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 RN7SL684P-201ENST00000465665 294 ntBASIC12.71□□□□□ -0.37
ATRXP46100 AC145285.1-201ENST00000469929 694 ntBASIC12.71□□□□□ -0.37
ATRXP46100 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATRXP46100 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC12.71□□□□□ -0.37
ATRXP46100 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC12.71□□□□□ -0.37
ATRXP46100 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ATRXP46100 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
ATRXP46100 AC092115.1-201ENST00000566277 1402 ntBASIC12.71□□□□□ -0.38
ATRXP46100 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATRXP46100 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATRXP46100 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATRXP46100 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ATRXP46100 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.71□□□□□ -0.38
ATRXP46100 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ATRXP46100 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.71□□□□□ -0.38
ATRXP46100 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
ATRXP46100 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC12.71□□□□□ -0.38
ATRXP46100 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.71□□□□□ -0.38
ATRXP46100 CCT8L1P-201ENST00000465400 1674 ntBASIC12.71□□□□□ -0.38
ATRXP46100 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
ATRXP46100 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ATRXP46100 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 ACTBP14-201ENST00000411655 1089 ntBASIC12.7□□□□□ -0.38
ATRXP46100 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC12.7□□□□□ -0.38
ATRXP46100 PGK1P2-201ENST00000431702 1214 ntBASIC12.7□□□□□ -0.38
ATRXP46100 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.7□□□□□ -0.38
ATRXP46100 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC12.7□□□□□ -0.38
ATRXP46100 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC12.7□□□□□ -0.38
ATRXP46100 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC12.7□□□□□ -0.38
ATRXP46100 GOLGA2P8-201ENST00000505201 779 ntBASIC12.7□□□□□ -0.38
ATRXP46100 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATRXP46100 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms