Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 AL050341.2-201ENST00000567508 1541 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 RCC2P1-201ENST00000452257 1476 ntBASIC13.67□□□□□ -0.22
HOXA6P31267 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HOXA6P31267 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.67□□□□□ -0.22
HOXA6P31267 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.67□□□□□ -0.22
HOXA6P31267 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC13.67□□□□□ -0.22
HOXA6P31267 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC13.67□□□□□ -0.22
HOXA6P31267 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HOXA6P31267 MIR5091-201ENST00000578707 93 ntBASIC13.67□□□□□ -0.22
HOXA6P31267 MIR3940-201ENST00000579148 102 ntBASIC13.67□□□□□ -0.22
HOXA6P31267 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HOXA6P31267 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.67□□□□□ -0.22
HOXA6P31267 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HOXA6P31267 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HOXA6P31267 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HOXA6P31267 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 KRT8P42-201ENST00000405771 1399 ntBASIC13.67□□□□□ -0.22
HOXA6P31267 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HOXA6P31267 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HOXA6P31267 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXA6P31267 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXA6P31267 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 TPT1P9-201ENST00000413759 514 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXA6P31267 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 DPY19L2P4-201ENST00000479881 442 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 RN7SL838P-201ENST00000481676 295 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 MTHFD2P7-201ENST00000483867 983 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 AC022447.5-201ENST00000504817 392 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.66□□□□□ -0.22
HOXA6P31267 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXA6P31267 ACTBP9-201ENST00000587663 1099 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXA6P31267 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 AC136475.7-201ENST00000602949 592 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXA6P31267 AC009041.4-201ENST00000620075 638 ntBASIC13.66□□□□□ -0.22
HOXA6P31267 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXA6P31267 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXA6P31267 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HOXA6P31267 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms