Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 AC244394.1-201ENST00000435000 1665 ntBASIC13.28□□□□□ -0.28
CHMP24386 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 AGAP12P-201ENST00000585227 2359 ntBASIC13.28□□□□□ -0.28
CHMP24386 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CHMP24386 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 AL008707.1-201ENST00000422498 534 ntBASIC13.28□□□□□ -0.28
CHMP24386 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.28□□□□□ -0.28
CHMP24386 AC005740.2-201ENST00000511085 419 ntBASIC13.28□□□□□ -0.28
CHMP24386 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CHMP24386 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.28□□□□□ -0.28
CHMP24386 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.28□□□□□ -0.28
CHMP24386 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 BAP1-211ENST00000615113 489 ntBASIC13.28□□□□□ -0.28
CHMP24386 AL136295.7-201ENST00000619226 1200 ntBASIC13.28□□□□□ -0.28
CHMP24386 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CHMP24386 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 AL008718.2-201ENST00000609206 1313 ntBASIC13.28□□□□□ -0.28
CHMP24386 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.28□□□□□ -0.28
CHMP24386 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.28□□□□□ -0.28
CHMP24386 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CHMP24386 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.28□□□□□ -0.28
CHMP24386 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHMP24386 AL928654.5-201ENST00000624831 2501 ntBASIC13.28□□□□□ -0.28
CHMP24386 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CHMP24386 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CHMP24386 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
CHMP24386 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.27□□□□□ -0.28
CHMP24386 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.27□□□□□ -0.28
CHMP24386 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHMP24386 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CHMP24386 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
CHMP24386 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 CALR4P-201ENST00000431943 946 ntBASIC13.27□□□□□ -0.29
CHMP24386 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.27□□□□□ -0.29
CHMP24386 RNMTL1P1-201ENST00000454103 560 ntBASIC13.27□□□□□ -0.29
CHMP24386 AKR7A2P1-201ENST00000460134 915 ntBASIC13.27□□□□□ -0.29
CHMP24386 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.27□□□□□ -0.29
CHMP24386 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.27□□□□□ -0.29
CHMP24386 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.27□□□□□ -0.29
CHMP24386 AC004923.1-202ENST00000642106 209 ntBASIC13.27□□□□□ -0.29
CHMP24386 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 AC009093.10-201ENST00000641956 1442 ntBASIC13.27□□□□□ -0.29
CHMP24386 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.27□□□□□ -0.29
CHMP24386 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.27□□□□□ -0.29
CHMP24386 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHMP24386 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.27□□□□□ -0.29
CHMP24386 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.27□□□□□ -0.29
CHMP24386 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms