Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TPM2P07951 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TPM2P07951 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 AL391647.1-201ENST00000395664 511 ntBASIC16.17■□□□□ 0.18
TPM2P07951 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 AC093433.1-201ENST00000458048 571 ntBASIC16.17■□□□□ 0.18
TPM2P07951 MESTP3-201ENST00000503460 968 ntBASIC16.17■□□□□ 0.18
TPM2P07951 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 SORD2P-201ENST00000558556 1069 ntBASIC16.17■□□□□ 0.18
TPM2P07951 AC103988.2-201ENST00000561804 725 ntBASIC16.17■□□□□ 0.18
TPM2P07951 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM2P07951 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 AL157996.1-201ENST00000624684 2299 ntBASIC16.17■□□□□ 0.18
TPM2P07951 USO1-201ENST00000264904 4135 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM2P07951 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 AC026271.4-201ENST00000578214 1833 ntBASIC16.17■□□□□ 0.18
TPM2P07951 FKBP4P6-201ENST00000457486 1332 ntBASIC16.17■□□□□ 0.18
TPM2P07951 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM2P07951 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TPM2P07951 GBP1P1-201ENST00000394662 1740 ntBASIC16.16■□□□□ 0.18
TPM2P07951 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TPM2P07951 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TPM2P07951 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM2P07951 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 LINC00567-201ENST00000569854 3409 ntBASIC16.16■□□□□ 0.18
TPM2P07951 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TPM2P07951 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 HSPA8P5-201ENST00000456928 2069 ntBASIC16.16■□□□□ 0.18
TPM2P07951 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 RN7SKP230-201ENST00000365642 335 ntBASIC16.16■□□□□ 0.18
TPM2P07951 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.16■□□□□ 0.18
TPM2P07951 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM2P07951 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 FTLP10-202ENST00000505798 471 ntBASIC16.16■□□□□ 0.18
TPM2P07951 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.16■□□□□ 0.18
TPM2P07951 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.16■□□□□ 0.18
TPM2P07951 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TPM2P07951 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TPM2P07951 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM2P07951 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 AC009474.1-201ENST00000455096 1565 ntBASIC16.16■□□□□ 0.18
TPM2P07951 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM2P07951 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TPM2P07951 AP003969.2-201ENST00000623739 2275 ntBASIC16.16■□□□□ 0.18
TPM2P07951 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM2P07951 TNRC18P1-201ENST00000502875 3650 ntBASIC16.16■□□□□ 0.18
TPM2P07951 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM2P07951 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TPM2P07951 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms