Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC244394.1-201ENST00000435000 1665 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC111170.3-201ENST00000624282 2464 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC019294.4-201ENST00000561777 2905 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CAPNS1P04632 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC011840.2-201ENST00000563063 1520 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 MRPL37P1-201ENST00000592451 1337 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPNS1P04632 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPNS1P04632 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPNS1P04632 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPNS1P04632 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPNS1P04632 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.08□□□□□ -0.15
CAPNS1P04632 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.08□□□□□ -0.15
CAPNS1P04632 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPNS1P04632 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.08□□□□□ -0.16
CAPNS1P04632 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.08□□□□□ -0.16
CAPNS1P04632 AP000358.1-201ENST00000456260 156 ntBASIC14.08□□□□□ -0.16
CAPNS1P04632 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.08□□□□□ -0.16
CAPNS1P04632 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CAPNS1P04632 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 AP000911.2-201ENST00000534330 502 ntBASIC14.08□□□□□ -0.16
CAPNS1P04632 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.08□□□□□ -0.16
CAPNS1P04632 AC087392.5-201ENST00000612517 489 ntBASIC14.08□□□□□ -0.16
CAPNS1P04632 AL157813.1-201ENST00000612996 587 ntBASIC14.08□□□□□ -0.16
CAPNS1P04632 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 AC005562.1-201ENST00000583030 3219 ntBASIC14.08□□□□□ -0.16
CAPNS1P04632 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPNS1P04632 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPNS1P04632 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPNS1P04632 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPNS1P04632 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CAPNS1P04632 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CAPNS1P04632 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CAPNS1P04632 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CAPNS1P04632 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CAPNS1P04632 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPNS1P04632 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPNS1P04632 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPNS1P04632 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPNS1P04632 GCSHP3-201ENST00000431120 391 ntBASIC14.07□□□□□ -0.16
CAPNS1P04632 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPNS1P04632 AC092638.2-201ENST00000441105 947 ntBASIC14.07□□□□□ -0.16
CAPNS1P04632 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPNS1P04632 LINC00634-202ENST00000505157 222 ntBASIC14.07□□□□□ -0.16
CAPNS1P04632 MRPL22P1-201ENST00000505398 616 ntBASIC14.07□□□□□ -0.16
CAPNS1P04632 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPNS1P04632 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms