Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.9□□□□□ -0.5
GAPDHP04406 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.9□□□□□ -0.5
GAPDHP04406 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.9□□□□□ -0.5
GAPDHP04406 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
GAPDHP04406 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.9□□□□□ -0.5
GAPDHP04406 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
GAPDHP04406 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.9□□□□□ -0.5
GAPDHP04406 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.9□□□□□ -0.5
GAPDHP04406 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GAPDHP04406 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.9□□□□□ -0.5
GAPDHP04406 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
GAPDHP04406 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
GAPDHP04406 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
GAPDHP04406 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
GAPDHP04406 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.9□□□□□ -0.51
GAPDHP04406 AC073869.1-201ENST00000415574 2762 ntBASIC11.9□□□□□ -0.51
GAPDHP04406 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
GAPDHP04406 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 AL031719.1-201ENST00000623365 2587 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 MEX3B-202ENST00000558133 4333 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 AGAP12P-201ENST00000585227 2359 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 MIR326-201ENST00000362220 95 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.89□□□□□ -0.51
GAPDHP04406 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.89□□□□□ -0.51
GAPDHP04406 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.89□□□□□ -0.51
GAPDHP04406 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 AC099336.1-201ENST00000417053 1171 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.89□□□□□ -0.51
GAPDHP04406 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.89□□□□□ -0.51
GAPDHP04406 ATP5G2P4-201ENST00000442175 420 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
GAPDHP04406 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 AC027237.1-201ENST00000560942 655 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 DUX4L46-201ENST00000566845 751 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 AC125807.2-201ENST00000513358 3514 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 VENTXP1-201ENST00000569334 2716 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 AL359845.1-201ENST00000458202 1648 ntBASIC11.89□□□□□ -0.51
GAPDHP04406 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.89□□□□□ -0.51
GAPDHP04406 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.89□□□□□ -0.51
GAPDHP04406 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GAPDHP04406 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GAPDHP04406 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GAPDHP04406 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
GAPDHP04406 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.88□□□□□ -0.51
GAPDHP04406 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.88□□□□□ -0.51
GAPDHP04406 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms