Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AC233724.9-201ENST00000511694 407 ntBASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AC004923.3-201ENST00000527532 355 ntBASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AC254633.1-201ENST00000606790 345 ntBASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AL357143.1-203ENST00000639750 881 ntBASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 AL157832.2-205ENST00000597245 1649 ntBASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 HCG18-241ENST00000602290 821 ntTSL 2 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 DBET-201ENST00000630918 3363 ntBASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SHANK2Q9UPX8 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 RBP4-203ENST00000371469 814 ntTSL 5 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 KRT18P44-201ENST00000416086 1285 ntBASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 MARK2P17-201ENST00000498560 841 ntBASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 AC016582.2-202ENST00000587765 1094 ntBASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 AC020922.4-201ENST00000621389 339 ntBASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SHANK2Q9UPX8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC20.27■□□□□ 0.83
SHANK2Q9UPX8 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHANK2Q9UPX8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHANK2Q9UPX8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHANK2Q9UPX8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 ZSCAN5DP-201ENST00000600684 1488 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 PI4KAP2-201ENST00000360806 2080 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 HDGF-202ENST00000368206 960 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms