Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 Z98885.3-201ENST00000624882 1757 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.78■□□□□ 0.12
CBX8Q9HC52 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 TSPY16P-201ENST00000449843 468 ntBASIC15.78■□□□□ 0.12
CBX8Q9HC52 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RBM8B-201ENST00000555532 525 ntBASIC15.78■□□□□ 0.12
CBX8Q9HC52 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 MIR6720-201ENST00000611664 98 ntBASIC15.78■□□□□ 0.12
CBX8Q9HC52 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC15.78■□□□□ 0.12
CBX8Q9HC52 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CBX8Q9HC52 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 AC006453.4-201ENST00000636949 1252 ntBASIC15.77■□□□□ 0.12
CBX8Q9HC52 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
CBX8Q9HC52 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CBX8Q9HC52 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CBX8Q9HC52 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CBX8Q9HC52 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CBX8Q9HC52 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CBX8Q9HC52 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC15.77■□□□□ 0.11
CBX8Q9HC52 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.76■□□□□ 0.11
CBX8Q9HC52 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CBX8Q9HC52 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBX8Q9HC52 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.76■□□□□ 0.11
CBX8Q9HC52 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC15.76■□□□□ 0.11
CBX8Q9HC52 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBX8Q9HC52 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBX8Q9HC52 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms