Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 AL590824.1-201ENST00000403828 1349 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 PI4KAP2-201ENST00000360806 2080 ntBASIC11.53□□□□□ -0.56
RAB40CQ96S21 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB40CQ96S21 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RAB40CQ96S21 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB40CQ96S21 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.52□□□□□ -0.56
RAB40CQ96S21 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB40CQ96S21 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
RAB40CQ96S21 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB40CQ96S21 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 HMGA1P1-201ENST00000415560 1062 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 BCRP1-201ENST00000444246 691 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 SERBP1P5-201ENST00000510079 1181 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 AL512310.5-201ENST00000551999 515 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 SPCS2P1-201ENST00000561636 679 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC008825.2-201ENST00000603374 718 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 MIR8072-201ENST00000614241 80 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.52□□□□□ -0.57
RAB40CQ96S21 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB40CQ96S21 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RAB40CQ96S21 AC009093.2-202ENST00000620513 2079 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms