Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 MIR4683-201ENST00000579659 81 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AL512343.1-201ENST00000605837 169 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 ZACNP1-201ENST00000612259 710 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AL805961.2-201ENST00000642139 4817 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AL118506.1-201ENST00000601296 3082 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AC005014.1-201ENST00000432006 2976 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 PCDHA6-201ENST00000378126 3267 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AC136604.1-202ENST00000425471 771 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AL355994.2-201ENST00000447882 704 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AC023310.1-201ENST00000554836 735 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 C2orf69P2-201ENST00000562032 1123 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 TNRC18P1-201ENST00000502875 3650 ntBASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTN4IP1Q8WWV3 AC125807.2-201ENST00000513358 3514 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms