Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 AC104117.1-201ENST00000517817 900 ntBASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 BCAR1P1-201ENST00000553953 636 ntBASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC9.09□□□□□ -0.96
ALMS1Q8TCU4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 GBAP1-208ENST00000566701 1546 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 PRDX2P3-201ENST00000515779 586 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 RPE-208ENST00000436630 1128 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC005077.3-201ENST00000449614 213 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 SARS2-211ENST00000598831 665 ntTSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 HSPA7-201ENST00000445535 1927 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 TBC1D3P1-201ENST00000590047 1693 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 SNORA50D-201ENST00000408059 134 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 IL6RP1-201ENST00000417848 1273 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 PTPA-219ENST00000435305 530 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC139143.1-201ENST00000441772 1207 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 BAP1-211ENST00000615113 489 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 AL139424.3-202ENST00000641619 917 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 KRT8P24-201ENST00000560290 1559 ntBASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALMS1Q8TCU4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 FTLP16-201ENST00000446400 513 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALMS1Q8TCU4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms