Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CDKL1Q00532 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.96□□□□□ -0.18
CDKL1Q00532 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.96□□□□□ -0.18
CDKL1Q00532 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
CDKL1Q00532 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.96□□□□□ -0.18
CDKL1Q00532 AP002353.1-201ENST00000528257 1599 ntBASIC13.96□□□□□ -0.18
CDKL1Q00532 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKL1Q00532 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDKL1Q00532 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AL136295.7-201ENST00000619226 1200 ntBASIC13.95□□□□□ -0.18
CDKL1Q00532 AC092299.1-201ENST00000632679 757 ntBASIC13.95□□□□□ -0.18
CDKL1Q00532 AC004923.1-202ENST00000642106 209 ntBASIC13.95□□□□□ -0.18
CDKL1Q00532 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDKL1Q00532 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 CES1P1-201ENST00000421606 1704 ntBASIC13.95□□□□□ -0.18
CDKL1Q00532 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKL1Q00532 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKL1Q00532 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKL1Q00532 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms