Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 RN7SL752P-201ENST00000463779 287 ntBASIC12.59□□□□□ -0.39
EFNB1P98172 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB1P98172 CHCHD2P2-201ENST00000503744 321 ntBASIC12.59□□□□□ -0.39
EFNB1P98172 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
EFNB1P98172 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.59□□□□□ -0.39
EFNB1P98172 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
EFNB1P98172 RHOXF1P1-202ENST00000635473 501 ntBASIC12.59□□□□□ -0.39
EFNB1P98172 AL139424.3-202ENST00000641619 917 ntBASIC12.59□□□□□ -0.39
EFNB1P98172 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
EFNB1P98172 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.59□□□□□ -0.39
EFNB1P98172 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
EFNB1P98172 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
EFNB1P98172 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB1P98172 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB1P98172 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB1P98172 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB1P98172 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.58□□□□□ -0.39
EFNB1P98172 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.58□□□□□ -0.39
EFNB1P98172 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB1P98172 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
EFNB1P98172 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 IL9RP3-201ENST00000442856 1674 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 AC100827.2-201ENST00000563214 1194 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 RN7SL455P-201ENST00000580629 282 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB1P98172 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 AC006538.3-201ENST00000612495 578 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 AP000346.4-201ENST00000614827 381 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 AC018629.1-201ENST00000623381 1736 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 AC015967.2-201ENST00000624092 234 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 AC006435.4-201ENST00000625037 234 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 AL356737.1-201ENST00000634391 234 ntBASIC12.58□□□□□ -0.4
EFNB1P98172 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
EFNB1P98172 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB1P98172 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.58□□□□□ -0.4
EFNB1P98172 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB1P98172 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
EFNB1P98172 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms