Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.69□□□□□ -0.38
VBP1P61758 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.69□□□□□ -0.38
VBP1P61758 AL627223.1-201ENST00000416693 442 ntBASIC12.69□□□□□ -0.38
VBP1P61758 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.69□□□□□ -0.38
VBP1P61758 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.69□□□□□ -0.38
VBP1P61758 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.69□□□□□ -0.38
VBP1P61758 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.69□□□□□ -0.38
VBP1P61758 AC093520.2-201ENST00000561830 333 ntBASIC12.69□□□□□ -0.38
VBP1P61758 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 AL049840.4-201ENST00000602422 811 ntBASIC12.69□□□□□ -0.38
VBP1P61758 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 AC093813.1-201ENST00000605066 256 ntBASIC12.69□□□□□ -0.38
VBP1P61758 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.69□□□□□ -0.38
VBP1P61758 AL391069.4-201ENST00000609583 481 ntBASIC12.69□□□□□ -0.38
VBP1P61758 BX088702.1-201ENST00000610784 235 ntBASIC12.69□□□□□ -0.38
VBP1P61758 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.69□□□□□ -0.38
VBP1P61758 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.69□□□□□ -0.38
VBP1P61758 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 TEX28P1-201ENST00000613479 1221 ntBASIC12.69□□□□□ -0.38
VBP1P61758 TEX28P2-201ENST00000617764 1221 ntBASIC12.69□□□□□ -0.38
VBP1P61758 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VBP1P61758 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VBP1P61758 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VBP1P61758 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VBP1P61758 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.69□□□□□ -0.38
VBP1P61758 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
VBP1P61758 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 AC020917.4-201ENST00000623994 1999 ntBASIC12.69□□□□□ -0.38
VBP1P61758 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 AL358781.1-202ENST00000321081 1360 ntBASIC12.69□□□□□ -0.38
VBP1P61758 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VBP1P61758 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 HLA-A-201ENST00000376802 1334 ntBASIC12.68□□□□□ -0.38
VBP1P61758 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 AL354861.3-201ENST00000600140 2412 ntBASIC12.68□□□□□ -0.38
VBP1P61758 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 AL845472.1-202ENST00000624675 4080 ntBASIC12.68□□□□□ -0.38
VBP1P61758 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.68□□□□□ -0.38
VBP1P61758 VDAC1P7-201ENST00000462417 847 ntBASIC12.68□□□□□ -0.38
VBP1P61758 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 AC044860.1-202ENST00000559481 777 ntBASIC12.68□□□□□ -0.38
VBP1P61758 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.68□□□□□ -0.38
VBP1P61758 AC140113.2-201ENST00000604370 208 ntBASIC12.68□□□□□ -0.38
VBP1P61758 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VBP1P61758 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
VBP1P61758 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms